ENSDARG00000053455


Danio rerio

Features
Gene ID: ENSDARG00000053455
  
Biological name :ccdc103
  
Synonyms : ccdc103 / coiled-coil domain containing 103 / Q6DGB6
  
Possible biological names infered from orthology : A6NFU0 / Coiled-coil domain-containing protein 103 / FAM187A / family with sequence similarity 187 member A / Q8IW40 / Q9D9P2
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 33420214
Gene end: 33422738
  
Corresponding Affymetrix probe sets: Dr.14471.1.S1_at (Zebrafish Array)   Dr.14471.2.A1_at (Zebrafish Array)   NM_001002753_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000069975
NCBI entrez gene - 437026     See in Manteia.
RefSeq - NM_001002753
RefSeq Peptide - NP_001002753
swissprot - Q6DGB6
ZFIN ID - ZDB-GENE-040718-253
Ensembl - ENSDARG00000053455
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000000918Gallus gallus
 A6NFU0ENSG00000214447Homo sapiens
 Q8IW40ENSG00000167131Homo sapiens
 Q9D9P2ENSMUSG00000020930Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR025986  RNA-polymerase II-associated protein 3-like, C-terminal domain
 IPR031733  Dynein attachment factor, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping IMP
 biological_processGO:0003143 embryonic heart tube morphogenesis IMP
 biological_processGO:0003146 heart jogging IMP
 biological_processGO:0003341 cilium movement IMP
 biological_processGO:0003351 epithelial cilium movement IMP
 biological_processGO:0007368 determination of left/right symmetry IMP
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0070286 axonemal dynein complex assembly IMP
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0005930 axoneme IDA
 cellular_componentGO:0031514 motile cilium IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain hydrocephalic , abnormal
Show

 ZFA:0000022 floor plate floor plate morphology , abnormal
Show

 ZFA:0000130 olfactory pit olfactory pit epithelial cilium movement arrested , abnormal
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 ZFA:0000150 pronephric duct pronephric duct cilium immobile , abnormal
pronephric duct inner dynein arm absent , abnormal
pronephric duct outer dynein arm absent , abnormal
pronephric duct cilium decreased length , abnormal
Show

 ZFA:0000151 pronephros pronephros cystic , abnormal
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 ZFA:0000402 olfactory bulb olfactory bulb cilium immobile , abnormal
olfactory bulb response to odorant process quality , abnormal
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 ZFA:0001094 whole organism whole organism lethal (sensu genetics) , abnormal
whole organism bent , abnormal
whole organism viability , abnormal
Show

 ZFA:0001115 trunk trunk anatomical axis curved , abnormal
Show

 ZFA:0001117 post-vent region post-vent region curved , abnormal
post-vent region curved ventral , abnormal
Show

 ZFA:0009358 ciliated olfactory receptor neuron ciliated olfactory receptor neuron response to odorant process quality , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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