ENSDARG00000054290


Danio rerio

Features
Gene ID: ENSDARG00000054290
  
Biological name :acin1a
  
Synonyms : acin1a / apoptotic chromatin condensation inducer 1a
  
Possible biological names infered from orthology : ACIN1 / apoptotic chromatin condensation inducer 1 / Q9JIX8 / Q9UKV3
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 38197820
Gene end: 38225472
  
Corresponding Affymetrix probe sets: Dr.26527.1.S1_at (Zebrafish Array)   Dr.8816.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117109
Ensembl peptide - ENSDARP00000121743
Ensembl peptide - ENSDARP00000121592
Ensembl peptide - ENSDARP00000104900
Ensembl peptide - ENSDARP00000113879
Ensembl peptide - ENSDARP00000114736
NCBI entrez gene - 368893     See in Manteia.
RefSeq - XM_009298703
swissprot - B0R0H9
swissprot - F1QFN9
swissprot - F1QQ73
swissprot - F1R6R1
swissprot - F1RAV6
swissprot - B0R0I0
ZFIN ID - ZDB-GENE-030616-583
Ensembl - ENSDARG00000054290
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ACIN1ENSG00000100813Homo sapiens
 Acin1ENSMUSG00000022185Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
acin1b / apoptotic chromatin condensation inducer 1b / ACIN1* / Q9JIX8* / Q9UKV3* / apoptotic chromatin condensation inducer 1*ENSDARG0000002684255


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR003034  SAP domain
 IPR032552  Acin1, RNSP1-SAP18 binding (RSB) motif
 IPR034257  Acinus, RNA recognition motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
Apoptotic cleavage of cellular proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr