ENSDARG00000054313


Danio rerio

Features
Gene ID: ENSDARG00000054313
  
Biological name :si:ch211-14a17.6
  
Synonyms : si:ch211-14a17.6
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 38285414
Gene end: 38288024
  
Corresponding Affymetrix probe sets: Dr.16612.1.S1_at (Zebrafish Array)   NM_001007179_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000146131
Ensembl peptide - ENSDARP00000061676
NCBI entrez gene - 100007955     See in Manteia.
RefSeq - NM_001007179
RefSeq Peptide - NP_001007180
swissprot - B0R022
ZFIN ID - ZDB-GENE-030616-589
Ensembl - ENSDARG00000054313
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-14a17.7ENSDARG0000003872043
zp3a.1 / zona pellucida glycoprotein 3a, tandem duplicate 1 / ZP3* / Q6PJE2* / P21754* / POMZP3* / P10761* / POM121 and ZP3 fusion* / zona pellucida glycoprotein 3*ENSDARG0000004212927
zp3a.2 / zona pellucida glycoprotein 3a, tandem duplicate 2 / ZP3* / Q6PJE2* / P21754* / POMZP3* / P10761* / POM121 and ZP3 fusion* / zona pellucida glycoprotein 3*ENSDARG0000004213026
zp3.2 / zona pellucida glycoprotein 3, tandem duplicate 2 / ZP3* / Q6PJE2* / P21754* / POMZP3* / P10761* / POM121 and ZP3 fusion* / zona pellucida glycoprotein 3*ENSDARG0000009076825
CR759892.1 / ZP3* / POMZP3* / Q6PJE2* / P21754* / POM121 and ZP3 fusion* / zona pellucida glycoprotein 3*ENSDARG0000011545725
zp3.2 / zona pellucida glycoprotein 3, tandem duplicate 2 / ZP3* / P21754* / POMZP3* / Q6PJE2* / POM121 and ZP3 fusion* / zona pellucida glycoprotein 3*ENSDARG0000011495825
zgc:171779 / ZP3* / POMZP3* / Q6PJE2* / P21754* / POM121 and ZP3 fusion* / zona pellucida glycoprotein 3*ENSDARG0000001690825
zp3b / zona pellucida glycoprotein 3b / ZP3* / Q6PJE2* / P21754* / POMZP3* / P10761* / POM121 and ZP3 fusion* / zona pellucida glycoprotein 3*ENSDARG0000003982823
zp3c / zona pellucida glycoprotein 3cENSDARG0000009291921
zp3d.1 / zona pellucida glycoprotein 3d tandem duplicate 1ENSDARG0000004008120
zp3d.2 / zona pellucida glycoprotein 3d tandem duplicate 2ENSDARG0000007017818
si:ch211-67f13.7ENSDARG0000007784512


Protein motifs (from Interpro)
Interpro ID Name
 IPR001507  Zona pellucida domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007339 binding of sperm to zona pellucida IBA
 biological_processGO:0035803 egg coat formation IBA
 biological_processGO:2000344 positive regulation of acrosome reaction IBA
 cellular_componentGO:0031012 extracellular matrix IBA
 molecular_functionGO:0032190 acrosin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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