ENSDARG00000054574


Danio rerio

Features
Gene ID: ENSDARG00000054574
  
Biological name :znhit1
  
Synonyms : zinc finger, HIT-type containing 1 / znhit1
  
Possible biological names infered from orthology : O43257 / Q8R331 / zinc finger, HIT domain containing 1
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 38604877
Gene end: 38611407
  
Corresponding Affymetrix probe sets: Dr.16573.1.S1_at (Zebrafish Array)   Dr.16573.2.A1_at (Zebrafish Array)   Dr.16573.2.A1_x_at (Zebrafish Array)   Dr.16573.3.S1_x_at (Zebrafish Array)   NM_001017401_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000071271
NCBI entrez gene - 407699     See in Manteia.
RefSeq - NM_001017401
RefSeq Peptide - NP_001017401
swissprot - Q561S5
ZFIN ID - ZDB-GENE-050417-272
Ensembl - ENSDARG00000054574
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 O43257ENSG00000106400Homo sapiens
 Q8R331ENSMUSG00000059518Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007529  Zinc finger, HIT-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031063 regulation of histone deacetylation IBA
 biological_processGO:0043486 histone exchange IBA
 cellular_componentGO:0000812 Swr1 complex IBA
 molecular_functionGO:0031491 nucleosome binding IBA
 molecular_functionGO:0042826 histone deacetylase binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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