ENSDARG00000054616


Danio rerio

Features
Gene ID: ENSDARG00000054616
  
Biological name :cldni
  
Synonyms : claudin i / cldni
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 30921246
Gene end: 30927002
  
Corresponding Affymetrix probe sets: Dr.3499.2.S1_a_at (Zebrafish Array)   Dr.3499.3.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000071321
Ensembl peptide - ENSDARP00000150584
NCBI entrez gene - 569084     See in Manteia.
RefSeq - NM_131768
RefSeq Peptide - NP_571843
swissprot - Q90XR6
ZFIN ID - ZDB-GENE-010328-9
Ensembl - ENSDARG00000054616
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR006187  Claudin
 IPR017974  Claudin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr