ENSDARG00000054890


Danio rerio

Features
Gene ID: ENSDARG00000054890
  
Biological name :rgra
  
Synonyms : retinal G protein coupled receptor a / rgra
  
Possible biological names infered from orthology : P47804 / Q9Z2B3 / retinal G protein coupled receptor / RGR
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 29446226
Gene end: 29455859
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000071634
NCBI entrez gene - 550575     See in Manteia.
RefSeq - NM_001017877
RefSeq Peptide - NP_001017877
swissprot - Q567Y2
ZFIN ID - ZDB-GENE-040924-6
Ensembl - ENSDARG00000054890
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RGRENSGALG00000002299Gallus gallus
 RGRENSG00000148604Homo sapiens
 RgrENSMUSG00000021804Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rgrb / retinal G protein coupled receptor b / RGR* / P47804* / retinal G protein coupled receptor*ENSDARG0000009872452


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR001793  Retinal pigment epithelium GPCR


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0007602 phototransduction IEA
 biological_processGO:0009584 detection of visible light IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0008020 G-protein coupled photoreceptor activity IBA


Pathways (from Reactome)
Pathway description
G alpha (i) signalling events
Opsins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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