ENSDARG00000055070


Danio rerio

Features
Gene ID: ENSDARG00000055070
  
Biological name :borcs7
  
Synonyms : BLOC-1 related complex subunit 7 / borcs7 / Q4V8S9
  
Possible biological names infered from orthology : BORCS7-ASMT / BORCS7-ASMT readthrough (NMD candidate) / Q96B45 / Q9CRC6
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 28612313
Gene end: 28615893
  
Corresponding Affymetrix probe sets: Dr.16036.1.A1_at (Zebrafish Array)   NM_001039988_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000071850
NCBI entrez gene - 664759     See in Manteia.
RefSeq - NM_001039988
RefSeq Peptide - NP_001035077
swissprot - Q4V8S9
ZFIN ID - ZDB-GENE-050913-112
Ensembl - ENSDARG00000055070
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BORCS7ENSGALG00000008124Gallus gallus
 BORCS7ENSG00000166275Homo sapiens
 BORCS7-ASMTENSG00000270316Homo sapiens
 Borcs7ENSMUSG00000062376Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR032143  BLOC-1-related complex subunit 7


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0099078 BORC complex ISS
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr