ENSDARG00000055339


Danio rerio

Features
Gene ID: ENSDARG00000055339
  
Biological name :si:ch73-1a9.4
  
Synonyms : si:ch73-1a9.4
  
Possible biological names infered from orthology : A6H611 / MIPEP / mitochondrial intermediate peptidase / Q99797
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 39091353
Gene end: 39123213
  
Corresponding Affymetrix probe sets: Dr.3939.1.A1_at (Zebrafish Array)   XM_680404_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000111708
Ensembl peptide - ENSDARP00000153621
NCBI entrez gene - 557349     See in Manteia.
RefSeq - XM_680404
swissprot - F1QIA6
ZFIN ID - ZDB-GENE-050506-64
Ensembl - ENSDARG00000055339
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MIPEPENSGALG00000017118Gallus gallus
 MIPEPENSG00000027001Homo sapiens
 MipepENSMUSG00000021993Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mipep / mitochondrial intermediate peptidase / A6H611* / Q99797*ENSDARG0000005534472


Protein motifs (from Interpro)
Interpro ID Name
 IPR001567  Peptidase M3A/M3B catalytic domain
 IPR024079  Metallopeptidase, catalytic domain superfamily
 IPR024080  Neurolysin/Thimet oligopeptidase, N-terminal
 IPR033851  Mitochondrial intermediate peptidase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006518 peptide metabolic process IBA
 biological_processGO:0006627 protein processing involved in protein targeting to mitochondrion IBA
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IBA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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