ENSDARG00000055527


Danio rerio

Features
Gene ID: ENSDARG00000055527
  
Biological name :cmn
  
Synonyms : calymmin / cmn
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 13118540
Gene end: 13164249
  
Corresponding Affymetrix probe sets: Dr.5404.1.S1_at (Zebrafish Array)   NM_131014_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000108898
Ensembl peptide - ENSDARP00000072306
NCBI entrez gene - 30208     See in Manteia.
RefSeq - NM_131014
RefSeq Peptide - NP_571089
swissprot - E7FFP2
swissprot - Q9PVF5
ZFIN ID - ZDB-GENE-000208-9
Ensembl - ENSDARG00000055527
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0031012 extracellular matrix IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism decreased length , abnormal
Show

 ZFA:0001115 trunk trunk shortened , abnormal
Show

 ZFA:0001189 vertebra vertebra fused with vertebra , abnormal
vertebra deformed , abnormal
vertebra split , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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