ENSDARG00000056008


Danio rerio

Features
Gene ID: ENSDARG00000056008
  
Biological name :atp5mc1
  
Synonyms : atp5mc1 / ATP synthase membrane subunit c locus 1
  
Possible biological names infered from orthology : Atp5g1 / ATP synthase F(0) complex subunit C1, mitochondrial / P05496 / Q9CR84
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 23599290
Gene end: 23604396
  
Corresponding Affymetrix probe sets: Dr.2860.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000072885
NCBI entrez gene - 406301     See in Manteia.
swissprot - Q6IQN6
ZFIN ID - ZDB-GENE-040426-1966
Ensembl - ENSDARG00000056008
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATP5MC1ENSGALG00000001330Gallus gallus
 P05496ENSG00000159199Homo sapiens
 Atp5g1ENSMUSG00000006057Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atp5mc3b / ATP synthase membrane subunit c locus 3b / Atp5g3* / P48201* / P56384* / ATP5MC3* / ATP synthase membrane subunit c locus 3* / ATP synthase F(0) complex subunit C3, mitochondrial *ENSDARG0000000944780
atp5mc3a / ATP synthase membrane subunit c locus 3a / Atp5g3* / P48201* / P56384* / ATP5MC3* / ATP synthase membrane subunit c locus 3* / ATP synthase F(0) complex subunit C3, mitochondrial *ENSDARG0000001777578


Protein motifs (from Interpro)
Interpro ID Name
 IPR000454  ATP synthase, F0 complex, subunit C
 IPR002379  V-ATPase proteolipid subunit C-like domain
 IPR020537  ATP synthase, F0 complex, subunit C, DCCD-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0015986 ATP synthesis coupled proton transport IBA
 biological_processGO:0015991 ATP hydrolysis coupled proton transport IEA
 cellular_componentGO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEA
 cellular_componentGO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0015078 proton transmembrane transporter activity IEA
 molecular_functionGO:0046933 proton-transporting ATP synthase activity, rotational mechanism IBA


Pathways (from Reactome)
Pathway description
Mitochondrial protein import
Formation of ATP by chemiosmotic coupling
Cristae formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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