ENSDARG00000056087


Danio rerio

Features
Gene ID: ENSDARG00000056087
  
Biological name :ecrg4a
  
Synonyms : ecrg4a / esophageal cancer related gene 4a
  
Possible biological names infered from orthology : 1500015O10Rik / C2orf40 / chromosome 2 open reading frame 40 / Q99LS0 / Q9H1Z8 / RIKEN cDNA 1500015O10 gene
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 6371919
Gene end: 6380653
  
Corresponding Affymetrix probe sets: Dr.6693.1.S1_at (Zebrafish Array)   NM_001017697_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000124698
Ensembl peptide - ENSDARP00000072984
NCBI entrez gene - 791762     See in Manteia.
RefSeq - NM_001017697
RefSeq Peptide - NP_001017697
swissprot - F8W2K3
swissprot - F1R4S5
ZFIN ID - ZDB-GENE-050417-189
Ensembl - ENSDARG00000056087
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 C2orf40ENSGALG00000043690Gallus gallus
 Q9H1Z8ENSG00000119147Homo sapiens
 Q99LS0ENSMUSG00000026051Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ecrg4b / esophageal cancer related gene 4b / Q99LS0* / Q9H1Z8* / C2orf40* / 1500015O10Rik* / RIKEN cDNA 1500015O10 gene* / chromosome 2 open reading frame 40*ENSDARG0000008871756


Protein motifs (from Interpro)
Interpro ID Name
 IPR028173  Augurin


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000110 fourth ventricle fourth ventricle edematous , abnormal
fourth ventricle hydrocephalic , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr