ENSDARG00000056204


Danio rerio

Features
Gene ID: ENSDARG00000056204
  
Biological name :zgc:113436
  
Synonyms : zgc:113436
  
Possible biological names infered from orthology : GIN1 / gypsy retrotransposon integrase 1 / Gypsy retrotransposon integrase-like protein 1 / Q8K259 / Q9NXP7
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 28030954
Gene end: 28052883
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073121
Ensembl peptide - ENSDARP00000154584
Ensembl peptide - ENSDARP00000134499
NCBI entrez gene - 503528     See in Manteia.
RefSeq - XM_005171845
swissprot - A3KGZ3
swissprot - A0A0R4II69
ZFIN ID - ZDB-GENE-050220-6
Ensembl - ENSDARG00000056204
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000003696Gallus gallus
 GIN1ENSG00000145723Homo sapiens
 Gin1ENSMUSG00000026333Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:163143ENSDARG0000007643714
zgc:153292ENSDARG0000007045813


Protein motifs (from Interpro)
Interpro ID Name
 IPR001584  Integrase, catalytic core
 IPR012337  Ribonuclease H-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015074 DNA integration IEA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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