ENSDARG00000056378


Danio rerio

Features
Gene ID: ENSDARG00000056378
  
Biological name :ifi30
  
Synonyms : ifi30 / interferon, gamma-inducible protein 30 / Q5XJN2
  
Possible biological names infered from orthology : IFI30, lysosomal thiol reductase / P13284
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 24762567
Gene end: 24767470
  
Corresponding Affymetrix probe sets: Dr.4759.1.S1_at (Zebrafish Array)   NM_001006057_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000073325
NCBI entrez gene - 336503     See in Manteia.
RefSeq - NM_001006057
RefSeq Peptide - NP_001006057
swissprot - Q5XJN2
ZFIN ID - ZDB-GENE-030131-8447
Ensembl - ENSDARG00000056378
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IFI30ENSGALG00000033694Gallus gallus
 IFI30ENSG00000216490Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-197i20.6 / IFI30* / P13284* / IFI30, lysosomal thiol reductase*ENSDARG0000007562950


Protein motifs (from Interpro)
Interpro ID Name
 IPR003119  Saposin A-type domain
 IPR004911  Gamma interferon inducible lysosomal thiol reductase GILT


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005764 lysosome IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0047134 protein-disulfide reductase activity IDA


Pathways (from Reactome)
Pathway description
MHC class II antigen presentation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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