ENSDARG00000056628


Danio rerio

Features
Gene ID: ENSDARG00000056628
  
Biological name :tmem170a
  
Synonyms : A3KPL7 / tmem170a / transmembrane protein 170A
  
Possible biological names infered from orthology : AC009163.4 / Q8WVE7 / Q9D342 / Tmem170
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 22405707
Gene end: 22414565
  
Corresponding Affymetrix probe sets: Dr.13975.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000073614
swissprot - A3KPL7
ZFIN ID - ZDB-GENE-040426-1622
Ensembl - ENSDARG00000056628
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMEM170AENSGALG00000002861Gallus gallus
 AC009163.4ENSG00000261717Homo sapiens
 Q8WVE7ENSG00000166822Homo sapiens
 Q9D342ENSMUSG00000031953Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmem170b / transmembrane protein 170B / P86050* / Q5T4T1*ENSDARG0000007120542


Protein motifs (from Interpro)
Interpro ID Name
 IPR019334  Transmembrane protein 170


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0071786 endoplasmic reticulum tubular network organization ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope ISS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr