ENSDARG00000056793


Danio rerio

Features
Gene ID: ENSDARG00000056793
  
Biological name :jazf1b
  
Synonyms : jazf1b / JAZF zinc finger 1b
  
Possible biological names infered from orthology : JAZF1 / JAZF zinc finger 1 / Juxtaposed with another zinc finger protein 1 / Q80ZQ5 / Q86VZ6
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 20738740
Gene end: 20800498
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073799
NCBI entrez gene - 494088     See in Manteia.
NCBI entrez gene - 572950     See in Manteia.
RefSeq - NM_001034992
RefSeq Peptide - NP_001030164
swissprot - Q49TU3
ZFIN ID - ZDB-GENE-041212-56
Ensembl - ENSDARG00000056793
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 JAZF1ENSGALG00000030455Gallus gallus
 JAZF1ENSG00000153814Homo sapiens
 Jazf1ENSMUSG00000063568Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
jazf1a / JAZF zinc finger 1a / JAZF1* / Q80ZQ5* / Q86VZ6* / JAZF zinc finger 1* / Juxtaposed with another zinc finger protein 1 *ENSDARG0000010255185


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007368 determination of left/right symmetry IMP
 biological_processGO:0060271 cilium assembly IMP
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle decreased size , abnormal
Kupffers vesicle cilium decreased length , abnormal
Show

 ZFA:0000130 olfactory pit olfactory pit cilium decreased length , abnormal
Show

 ZFA:0000150 pronephric duct pronephric duct cilium decreased length , abnormal
Show

 ZFA:0001094 whole organism whole organism curved ventral , abnormal
whole organism increased curvature , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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