ENSDARG00000057272


Danio rerio

Features
Gene ID: ENSDARG00000057272
  
Biological name :slc30a9
  
Synonyms : Q5PQZ3 / slc30a9 / solute carrier family 30 (zinc transporter), member 9
  
Possible biological names infered from orthology : Q5IRJ6 / Q6PML9 / solute carrier family 30 member 9
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 44804326
Gene end: 44826422
  
Corresponding Affymetrix probe sets: Dr.12771.1.A1_at (Zebrafish Array)   Dr.16136.1.S1_at (Zebrafish Array)   Dr.8795.1.S1_at (Zebrafish Array)   NM_001008575_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000148224
Ensembl peptide - ENSDARP00000074317
Ensembl peptide - ENSDARP00000114845
Ensembl peptide - ENSDARP00000142124
NCBI entrez gene - 497184     See in Manteia.
RefSeq - NM_001008575
RefSeq - XM_005173334
RefSeq Peptide - NP_001008575
swissprot - F1QJE8
swissprot - A0A140LFU8
swissprot - Q5PQZ3
ZFIN ID - ZDB-GENE-040724-254
Ensembl - ENSDARG00000057272
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000031415Gallus gallus
 Q6PML9ENSG00000014824Homo sapiens
 Q5IRJ6ENSMUSG00000029221Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002524  Cation efflux protein
 IPR009061  Putative DNA-binding domain superfamily
 IPR022656  XPA, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006812 cation transport IEA
 biological_processGO:0006829 zinc ion transport ISS
 biological_processGO:0006882 cellular zinc ion homeostasis ISS
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0071577 zinc ion transmembrane transport IEA
 biological_processGO:0098655 cation transmembrane transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle ISS
 molecular_functionGO:0005385 zinc ion transmembrane transporter activity ISS
 molecular_functionGO:0008324 cation transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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