ENSDARG00000057789


Danio rerio

Features
Gene ID: ENSDARG00000057789
  
Biological name :lyz
  
Synonyms : lysozyme / lyz
  
Possible biological names infered from orthology : lysozyme like 4 / LYZL4 / Q96KX0 / Q9D925
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 24035863
Gene end: 24038800
  
Corresponding Affymetrix probe sets: Dr.12602.1.S1_at (Zebrafish Array)   NM_139180_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000074998
NCBI entrez gene - 677744     See in Manteia.
RefSeq - NM_139180
RefSeq Peptide - NP_631919
swissprot - Q24JW2
ZFIN ID - ZDB-GENE-020515-2
Ensembl - ENSDARG00000057789
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LYZL4ENSG00000157093Homo sapiens
 Lyzl4ENSMUSG00000032530Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000974  Glycoside hydrolase, family 22, lysozyme
 IPR001916  Glycoside hydrolase, family 22
 IPR019799  Glycoside hydrolase, family 22, conserved site
 IPR023346  Lysozyme-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0016998 cell wall macromolecule catabolic process IBA
 biological_processGO:0050829 defense response to Gram-negative bacterium IBA
 biological_processGO:0050830 defense response to Gram-positive bacterium IBA
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0003796 lysozyme activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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