ENSDARG00000057983


Danio rerio

Features
Gene ID: ENSDARG00000057983
  
Biological name :svopl
  
Synonyms : Q1LVS8 / svopl / SVOP-like
  
Possible biological names infered from orthology : Putative transporter SVOPL / Q6PDF3 / Q8N434
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 9769050
Gene end: 9781132
  
Corresponding Affymetrix probe sets: Dr.19318.1.A1_at (Zebrafish Array)   NM_001007407_at (Zebrafish Genome Array with custom cdf files)   NM_001045229_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000075190
Ensembl peptide - ENSDARP00000125241
Ensembl peptide - ENSDARP00000125270
Ensembl peptide - ENSDARP00000125582
NCBI entrez gene - 492766     See in Manteia.
RefSeq - NM_001045229
RefSeq - NM_001007407
RefSeq Peptide - NP_001007408
RefSeq Peptide - NP_001038694
swissprot - H0WFF0
swissprot - H0WEJ2
swissprot - Q1LVS8
ZFIN ID - ZDB-GENE-041114-109
Ensembl - ENSDARG00000057983
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SVOPLENSGALG00000012812Gallus gallus
 SVOPLENSG00000157703Homo sapiens
 SvoplENSMUSG00000029830Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
svopa / SV2 related protein a / SVOP* / Q8N4V2* / Q8BFT9* / SV2 related protein* / Synaptic vesicle 2-related protein *ENSDARG0000005683334
svopb / SV2 related protein b / SVOP* / Q8N4V2* / Q8BFT9* / SV2 related protein* / Synaptic vesicle 2-related protein *ENSDARG0000001495127
sv2 / synaptic vesicle glycoprotein 2ENSDARG0000009183325
sv2c / synaptic vesicle glycoprotein 2C / Q496J9* / Q69ZS6*ENSDARG0000005999722
sv2a / synaptic vesicle glycoprotein 2A / Q7L0J3* / Q9JIS5*ENSDARG0000005994522
sv2bb / synaptic vesicle glycoprotein 2Bb / SV2B* / Q8BG39* / Q7L1I2* / synaptic vesicle glycoprotein 2B*ENSDARG0000006071122
sv2ba / synaptic vesicle glycoprotein 2Ba / SV2B* / Q8BG39* / Q7L1I2* / synaptic vesicle glycoprotein 2B*ENSDARG0000005742721


Protein motifs (from Interpro)
Interpro ID Name
 IPR005828  Major facilitator, sugar transporter-like
 IPR011701  Major facilitator superfamily
 IPR020846  Major facilitator superfamily domain
 IPR027378  Cyclic nucleotide-regulated ion channel, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0022857 transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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