ENSDARG00000058154


Danio rerio

Features
Gene ID: ENSDARG00000058154
  
Biological name :znf385c
  
Synonyms : zinc finger protein 385C / znf385c
  
Possible biological names infered from orthology : A2A5E6 / Zfp385c
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 17744339
Gene end: 17860047
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000055889
Ensembl peptide - ENSDARP00000113568
Ensembl peptide - ENSDARP00000153205
NCBI entrez gene - 793202     See in Manteia.
swissprot - E7FE25
swissprot - E9QJ33
ZFIN ID - ZDB-GENE-091112-1
Ensembl - ENSDARG00000058154
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZNF385CENSGALG00000003403Gallus gallus
 ZNF385CENSG00000187595Homo sapiens
 A2A5E6ENSMUSG00000014198Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
znf385b / zinc finger protein 385B / Q569K4* / Q8BXJ8* / Zfp385b*ENSDARG0000000606536
znf385a / zinc finger protein 385A / Q8VD12* / Q96PM9* / Zfp385a*ENSDARG0000000989933
znf385d / zinc finger protein 385D / Q9H6B1*ENSDARG0000008616222


Protein motifs (from Interpro)
Interpro ID Name
 IPR000690  Matrin/U1-C, C2H2-type zinc finger
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0072332 intrinsic apoptotic signaling pathway by p53 class mediator IBA
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0002039 p53 binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000029 hindbrain hindbrain apoptotic , abnormal
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 ZFA:0000109 forebrain forebrain apoptotic , abnormal
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 ZFA:0000114 heart heart apoptotic , abnormal
heart edematous , abnormal
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 ZFA:0001114 head head chondrocyte maturity , abnormal
head chondrocyte decreased amount , abnormal
head decreased size , abnormal
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 ZFA:0001205 Meckel s cartilage Meckels cartilage decreased width , abnormal
Meckels cartilage endochondral ossification premature , abnormal
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 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton atrophied , abnormal
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 ZFA:0001306 pharyngeal arch pharyngeal arch apoptotic , abnormal
Show

 ZFA:0001400 ceratohyal cartilage ceratohyal cartilage decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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