ENSDARG00000058292


Danio rerio

Features
Gene ID: ENSDARG00000058292
  
Biological name :sephs1
  
Synonyms : Q7ZW38 / selenophosphate synthetase 1 / sephs1
  
Possible biological names infered from orthology : P49903 / Q8BH69 / Selenide, water dikinase 1
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 8367602
Gene end: 8380120
  
Corresponding Affymetrix probe sets: Dr.20919.1.S1_at (Zebrafish Array)   NM_199701_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000121969
Ensembl peptide - ENSDARP00000148109
Ensembl peptide - ENSDARP00000075586
NCBI entrez gene - 324947     See in Manteia.
RefSeq - NM_199701
RefSeq Peptide - NP_955995
swissprot - A3KPM5
swissprot - Q7ZW38
ZFIN ID - ZDB-GENE-030131-3670
Ensembl - ENSDARG00000058292
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEPHS1ENSGALG00000014575Gallus gallus
 P49903ENSG00000086475Homo sapiens
 Q8BH69ENSMUSG00000026662Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sephs2 / selenophosphate synthetase 2 / P97364* / Q99611* / Selenide, water dikinase 2 *ENSDARG0000001765964


Protein motifs (from Interpro)
Interpro ID Name
 IPR004536  Selenophosphate synthetase
 IPR010918  PurM-like, C-terminal domain
 IPR016188  PurM-like, N-terminal domain
 IPR023061  Selenophosphate synthetase, class I


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016260 selenocysteine biosynthetic process IEA
 biological_processGO:0016310 phosphorylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005886 plasma membrane ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031965 nuclear membrane ISS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004756 selenide, water dikinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0042803 protein homodimerization activity ISS
 molecular_functionGO:0046982 protein heterodimerization activity ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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