ENSDARG00000058394


Danio rerio

Features
Gene ID: ENSDARG00000058394
  
Biological name :tagln3b
  
Synonyms : abhd10b / tagln3b / transgelin 3b
  
Possible biological names infered from orthology : ABHD10 / abhydrolase domain containing 10 / Q6PE15 / Q9NUJ1
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 21917012
Gene end: 21934571
  
Corresponding Affymetrix probe sets: Dr.2891.1.S1_at (Zebrafish Array)   Dr.3966.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000116441
Ensembl peptide - ENSDARP00000147134
Ensembl peptide - ENSDARP00000147917
Ensembl peptide - ENSDARP00000101853
NCBI entrez gene - 492622     See in Manteia.
NCBI entrez gene - 797861     See in Manteia.
RefSeq - NM_199720
RefSeq Peptide - NP_956014
swissprot - E7F9Y7
swissprot - Q6P697
ZFIN ID - ZDB-GENE-030131-4199
ZFIN ID - ZDB-GENE-041111-196
Ensembl - ENSDARG00000058394
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABHD10ENSGALG00000015378Gallus gallus
 ABHD10ENSG00000144827Homo sapiens
 Abhd10ENSMUSG00000033157Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abhd10a / abhydrolase domain containing 10a / ABHD10* / Q6PE15* / Q9NUJ1* / abhydrolase domain containing 10*ENSDARG0000007643569


Protein motifs (from Interpro)
Interpro ID Name
 IPR000073  Alpha/beta hydrolase fold-1
 IPR000557  Calponin repeat
 IPR001061  Transgelin-2
 IPR001715  Calponin homology domain
 IPR003096  Smooth muscle protein/calponin
 IPR029058  Alpha/Beta hydrolase fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
Glucuronidation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr