ENSDARG00000058608


Danio rerio

Features
Gene ID: ENSDARG00000058608
  
Biological name :wsb2
  
Synonyms : WD repeat and SOCS box containing 2 / wsb2
  
Possible biological names infered from orthology : O54929 / Q9NYS7
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 12549551
Gene end: 12560569
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119398
NCBI entrez gene - 100307075     See in Manteia.
RefSeq - NM_001243384
RefSeq Peptide - NP_001230313
swissprot - B8JKT2
ZFIN ID - ZDB-GENE-081104-26
Ensembl - ENSDARG00000058608
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WSB2ENSGALG00000008151Gallus gallus
 WSB2ENSG00000176871Homo sapiens
 Wsb2ENSMUSG00000029364Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
wsb1 / Q7T2F6 / WD repeat and SOCS box containing 1 / O54927* / Q9Y6I7*ENSDARG0000002134336
ciao1 / Q6P0D9 / cytosolic iron-sulfur assembly component 1 / O76071* / Q99KN2* / Probable cytosolic iron-sulfur protein assembly protein CIAO1 *ENSDARG0000005921216


Protein motifs (from Interpro)
Interpro ID Name
 IPR001496  SOCS box domain
 IPR001680  WD40 repeat
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 cellular_componentGO:0005622 intracellular IEA


Pathways (from Reactome)
Pathway description
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr