ENSDARG00000058824


Danio rerio

Features
Gene ID: ENSDARG00000058824
  
Biological name :mrpl4
  
Synonyms : mitochondrial ribosomal protein L4 / mrpl4 / Q503X2
  
Possible biological names infered from orthology : 39S ribosomal protein L4, mitochondrial / Q9BYD3 / Q9DCU6
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 11319141
Gene end: 11331146
  
Corresponding Affymetrix probe sets: Dr.1052.1.S1_at (Zebrafish Array)   NM_001020736_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000076204
Ensembl peptide - ENSDARP00000140283
Ensembl peptide - ENSDARP00000134997
NCBI entrez gene - 553771     See in Manteia.
RefSeq - NM_001020736
RefSeq - XM_005155747
RefSeq Peptide - NP_001018572
swissprot - A0A0R4ISU6
swissprot - Q503X2
swissprot - A0A0R4ILL2
ZFIN ID - ZDB-GENE-050522-388
Ensembl - ENSDARG00000058824
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MRPL4ENSG00000105364Homo sapiens
 Mrpl4ENSMUSG00000003299Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002136  Ribosomal protein L4/L1e
 IPR013005  50S ribosomal protein uL4
 IPR023574  Ribosomal protein L4 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005762 mitochondrial large ribosomal subunit ISS
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022626 cytosolic ribosome IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
Mitochondrial translation elongation
Mitochondrial translation termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr