ENSDARG00000058861


Danio rerio

Features
Gene ID: ENSDARG00000058861
  
Biological name :ncln
  
Synonyms : ncln / nicalin / Q6NZ07
  
Possible biological names infered from orthology : Q8VCM8 / Q969V3
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 5233396
Gene end: 5252012
  
Corresponding Affymetrix probe sets: Dr.4087.1.A1_at (Zebrafish Array)   NM_207057_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000076240
Ensembl peptide - ENSDARP00000122266
NCBI entrez gene - 336844     See in Manteia.
RefSeq - XM_005161589
RefSeq - NM_207057
RefSeq Peptide - NP_996940
swissprot - Q6NZ07
ZFIN ID - ZDB-GENE-030131-8788
Ensembl - ENSDARG00000058861
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NCLNENSGALG00000013369Gallus gallus
 NCLNENSG00000125912Homo sapiens
 NclnENSMUSG00000020238Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:109965ENSDARG0000001212646


Protein motifs (from Interpro)
Interpro ID Name
 IPR007484  Peptidase M28
 IPR016574  Nicalin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0009966 regulation of signal transduction IMP
 biological_processGO:0048484 enteric nervous system development IMP
 biological_processGO:1900176 negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry IMP
 cellular_componentGO:0005789 endoplasmic reticulum membrane IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001338 intestine intestine distal region lacks all parts of type enteric neuron , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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