ENSDARG00000058946


Danio rerio

Features
Gene ID: ENSDARG00000058946
  
Biological name :CU856539.2
  
Synonyms : CU856539.2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 2600830
Gene end: 2667208
  
Corresponding Affymetrix probe sets: Dr.11426.1.A1_at (Zebrafish Array)   XM_679943_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000091785
NCBI entrez gene - 556989     See in Manteia.
RefSeq - XM_005172588
RefSeq - XM_679943
swissprot - F1QIJ5
Ensembl - ENSDARG00000058946
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000037611Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
myo3a / myosin IIIA / Q8NEV4*ENSDARG0000001018633
myo3b / myosin IIIB / Q1EG27* / Q8WXR4*ENSDARG0000000689230
myo16 / myosin XVI / Q5DU14* / Q9Y6X6* / Unconventional myosin-XVI *ENSDARG0000007858223
myo19 / myosin XIX / Q5SV80* / Q96H55* / Unconventional myosin-XIX *ENSDARG0000007376116


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR000980  SH2 domain
 IPR001609  Myosin head, motor domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 cellular_componentGO:0016459 myosin complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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