ENSDARG00000059163


Danio rerio

Features
Gene ID: ENSDARG00000059163
  
Biological name :rbp3
  
Synonyms : rbp3 / retinol binding protein 3
  
Possible biological names infered from orthology : P10745
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 2665081
Gene end: 2670156
  
Corresponding Affymetrix probe sets: Dr.5738.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000118871
NCBI entrez gene - 30735     See in Manteia.
RefSeq - NM_131451
RefSeq Peptide - NP_571526
swissprot - F1Q9N9
ZFIN ID - ZDB-GENE-990415-132
Ensembl - ENSDARG00000059163
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBP3ENSGALG00000005978Gallus gallus
 RBP3ENSG00000265203Homo sapiens
 Rbp3ENSMUSG00000041534Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
irbpl / interphotoreceptor retinoid-binding protein like / RBP3* / P10745* / retinol binding protein 3*ENSDARG0000009651927


Protein motifs (from Interpro)
Interpro ID Name
 IPR005151  Tail specific protease
 IPR029045  ClpP/crotonase-like domain superfamily
 IPR032956  Retinol-binding protein 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0007601 visual perception IEA
 molecular_functionGO:0005501 retinoid binding IEA
 molecular_functionGO:0008236 serine-type peptidase activity IEA
 molecular_functionGO:0070538 oleic acid binding IDA
 molecular_functionGO:1904768 all-trans-retinol binding IDA


Pathways (from Reactome)
Pathway description
The retinoid cycle in cones (daylight vision)
The canonical retinoid cycle in rods (twilight vision)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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