ENSDARG00000059323


Danio rerio

Features
Gene ID: ENSDARG00000059323
  
Biological name :rpn1
  
Synonyms : ribophorin I / rpn1
  
Possible biological names infered from orthology : Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 / P04843 / Q91YQ5
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 3892386
Gene end: 3907937
  
Corresponding Affymetrix probe sets: Dr.445.2.S1_a_at (Zebrafish Array)   NM_197934_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000117047
Ensembl peptide - ENSDARP00000076844
NCBI entrez gene - 325561     See in Manteia.
RefSeq - NM_197934
RefSeq Peptide - NP_922916
swissprot - F1QTB5
swissprot - F1QQM6
ZFIN ID - ZDB-GENE-030131-4286
Ensembl - ENSDARG00000059323
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPN1ENSGALG00000005907Gallus gallus
 RPN1ENSG00000163902Homo sapiens
 Rpn1ENSMUSG00000030062Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007676  Ribophorin I


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0018279 protein N-linked glycosylation via asparagine IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0008250 oligosaccharyltransferase complex IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IBA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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