ENSDARG00000059774


Danio rerio

Features
Gene ID: ENSDARG00000059774
  
Biological name :dub
  
Synonyms : dub / duboraya
  
Possible biological names infered from orthology : Q3UZA1 / Q6JBY9 / RCSD1 / RCSD domain containing 1
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 22917221
Gene end: 22951646
  
Corresponding Affymetrix probe sets: Dr.22619.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000077884
Ensembl peptide - ENSDARP00000149820
Ensembl peptide - ENSDARP00000151739
swissprot - F1QHP1
ZFIN ID - ZDB-GENE-060825-81
Ensembl - ENSDARG00000059774
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RCSD1ENSGALG00000040275Gallus gallus
 RCSD1ENSG00000198771Homo sapiens
 Rcsd1ENSMUSG00000040723Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:153184 / RCSD1* / Q6JBY9* / RCSD domain containing 1*ENSDARG0000009964527


Protein motifs (from Interpro)
Interpro ID Name
 IPR029341  FAM21/CAPZIP domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping IMP
 biological_processGO:0003146 heart jogging IMP
 biological_processGO:0007368 determination of left/right symmetry IMP
 biological_processGO:0060271 cilium assembly IMP
 biological_processGO:0061341 non-canonical Wnt signaling pathway involved in heart development IMP
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle cilium decreased length , abnormal
Kupffers vesicle cilium decreased amount , abnormal
Show

 ZFA:0000022 floor plate floor plate undulate , abnormal
Show

 ZFA:0000112 gut gut inverted , abnormal
Show

 ZFA:0000140 pancreas pancreas inverted , abnormal
Show

 ZFA:0000155 somite somite increased width , abnormal
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 ZFA:0000360 heart tube heart tube inverted , abnormal
Show

 ZFA:0001117 post-vent region post-vent region decreased length , abnormal
post-vent region curved ventral , abnormal
post-vent region kinked , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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