ENSDARG00000060065


Danio rerio

Features
Gene ID: ENSDARG00000060065
  
Biological name :ubap2b
  
Synonyms : ubap2b / ubiquitin associated protein 2b
  
Possible biological names infered from orthology : Q5T6F2 / Q91VX2 / UBAP2 / ubiquitin associated protein 2
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 45293743
Gene end: 45328652
  
Corresponding Affymetrix probe sets: Dr.1992.1.S1_at (Zebrafish Array)   NM_001082481_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000120883
Ensembl peptide - ENSDARP00000145520
Ensembl peptide - ENSDARP00000120289
NCBI entrez gene - 570789     See in Manteia.
RefSeq - NM_001082481
RefSeq - XM_005167271
RefSeq - XM_005167272
RefSeq - XM_009304242
RefSeq Peptide - NP_001075950
swissprot - B8JHU9
swissprot - A2RUY5
ZFIN ID - ZDB-GENE-070209-122
Ensembl - ENSDARG00000060065
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000013809Gallus gallus
 UBAP2ENSGALG00000040780Gallus gallus
 UBAP2ENSG00000137073Homo sapiens
 Ubap2ENSMUSG00000028433Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ubap2a / ubiquitin associated protein 2a / UBAP2* / Q91VX2* / Q5T6F2* / ubiquitin associated protein 2*ENSDARG0000008831847
ubap2l / ubiquitin associated protein 2-like / Q14157* / Q80X50*ENSDARG0000006321939


Protein motifs (from Interpro)
Interpro ID Name
 IPR009060  UBA-like superfamily
 IPR015940  Ubiquitin-associated domain
 IPR022166  Protein of unknown function DUF3697, ubiquitin-associated protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010628 positive regulation of gene expression IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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