ENSDARG00000060338


Danio rerio

Features
Gene ID: ENSDARG00000060338
  
Biological name :trmt12
  
Synonyms : trmt12 / tRNA methyltransferase 12 homolog (S. cerevisiae)
  
Possible biological names infered from orthology : Q53H54 / Q8BG71 / tRNA methyltransferase 12 homolog / tRNA wybutosine-synthesizing
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 35414632
Gene end: 35422777
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000079349
Ensembl peptide - ENSDARP00000152027
NCBI entrez gene - 564925     See in Manteia.
RefSeq - NM_001077164
RefSeq Peptide - NP_001070632
swissprot - F1QGD7
ZFIN ID - ZDB-GENE-060825-182
Ensembl - ENSDARG00000060338
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRMT12ENSGALG00000006773Gallus gallus
 Q53H54ENSG00000183665Homo sapiens
 Q8BG71ENSMUSG00000037085Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase
 IPR030382  SAM-dependent methyltransferase TRM5/TYW2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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