ENSDARG00000060600


Danio rerio

Features
Gene ID: ENSDARG00000060600
  
Biological name :capn15
  
Synonyms : calpain 15 / capn15
  
Possible biological names infered from orthology : Mus musculus calpain 15 (Capn15), transcript variant 1, mRNA. / O75808 / Q9JLG8
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 39027481
Gene end: 39084453
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000080000
Ensembl peptide - ENSDARP00000151290
NCBI entrez gene - 100330198     See in Manteia.
RefSeq - XM_002663847
swissprot - E7FAX5
ZFIN ID - ZDB-GENE-140106-70
Ensembl - ENSDARG00000060600
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CAPN15ENSGALG00000002018Gallus gallus
 CAPN15ENSG00000103326Homo sapiens
 Capn15ENSMUSG00000037326Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
capn10 / calpain 10 / Q9ESK3* / Q9HC96*ENSDARG0000007663411
capn7 / calpain 7 / Q9Y6W3*ENSDARG000001029879


Protein motifs (from Interpro)
Interpro ID Name
 IPR000169  Cysteine peptidase, cysteine active site
 IPR001300  Peptidase C2, calpain, catalytic domain
 IPR001876  Zinc finger, RanBP2-type
 IPR022684  Peptidase C2, calpain family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004198 calcium-dependent cysteine-type endopeptidase activity IBA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Degradation of the extracellular matrix


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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