ENSDARG00000061180


Danio rerio

Features
Gene ID: ENSDARG00000061180
  
Biological name :vps45
  
Synonyms : vacuolar protein sorting 45 homolog (S. cerevisiae) / vps45
  
Possible biological names infered from orthology : P97390 / Q9NRW7 / vacuolar protein sorting 45 / vacuolar protein sorting 45 homolog
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 42397287
Gene end: 42416696
  
Corresponding Affymetrix probe sets: Dr.15874.1.S1_at (Zebrafish Array)   Dr.15874.2.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000081395
NCBI entrez gene - 561653     See in Manteia.
RefSeq - NM_001256656
RefSeq Peptide - NP_001243585
swissprot - A8E7N5
ZFIN ID - ZDB-GENE-060503-526
Ensembl - ENSDARG00000061180
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VPS45ENSGALG00000013899Gallus gallus
 VPS45ENSG00000136631Homo sapiens
 Vps45ENSMUSG00000015747Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001619  Sec1-like protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006904 vesicle docking involved in exocytosis IEA
 biological_processGO:0016192 vesicle-mediated transport IEA


Pathways (from Reactome)
Pathway description
Intra-Golgi traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009327 neutrophil neutrophil decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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