ENSDARG00000061377


Danio rerio

Features
Gene ID: ENSDARG00000061377
  
Biological name :efcab1
  
Synonyms : efcab1 / EF-hand calcium binding domain 1
  
Possible biological names infered from orthology : 1700109H08Rik / EF-hand calcium-binding domain-containing protein 1 / Q9D3N2 / Q9HAE3 / RIKEN cDNA 1700109H08 gene
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 40182641
Gene end: 40186328
  
Corresponding Affymetrix probe sets: Dr.6391.3.S1_at (Zebrafish Array)   NM_001044860_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000081908
Ensembl peptide - ENSDARP00000125834
NCBI entrez gene - 558421     See in Manteia.
RefSeq - NM_001044860
RefSeq Peptide - NP_001038325
swissprot - I3ISF7
swissprot - Q1LWZ0
ZFIN ID - ZDB-GENE-040914-40
Ensembl - ENSDARG00000061377
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EFCAB1ENSGALG00000009473Gallus gallus
 EFCAB1ENSG00000034239Homo sapiens
 1700109H08RikENSMUSG00000008307Mus musculus
 Efcab1ENSMUSG00000068617Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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