ENSDARG00000061527


Danio rerio

Features
Gene ID: ENSDARG00000061527
  
Biological name :nxt2
  
Synonyms : nuclear transport factor 2-like export factor 2 / nxt2
  
Possible biological names infered from orthology : NTF2-related export protein 1 / NTF2-related export protein 2 / nuclear transport factor 2 like export factor 1 / NXT1 / Q3UNA4 / Q9NPJ8 / Q9QZV9 / Q9UKK6
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 28459439
Gene end: 28473639
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000114020
Ensembl peptide - ENSDARP00000142206
Ensembl peptide - ENSDARP00000123239
NCBI entrez gene - 751738     See in Manteia.
RefSeq - XM_017359027
RefSeq Peptide - NP_001299841
swissprot - E9QCN6
swissprot - A0A140LG28
ZFIN ID - ZDB-GENE-050521-1
Ensembl - ENSDARG00000061527
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NXT2ENSGALG00000008092Gallus gallus
 NXT1ENSG00000132661Homo sapiens
 NXT2ENSG00000101888Homo sapiens
 Nxt1ENSMUSG00000036992Mus musculus
 Nxt2ENSMUSG00000042271Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002075  Nuclear transport factor 2
 IPR018222  Nuclear transport factor 2, eukaryote
 IPR032710  NTF2-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007507 heart development IMP
 biological_processGO:0051028 mRNA transport IGI


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000114 heart heart quality , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000055076 nxf1 / nuclear RNA export factor 1 / NXF3* / NXF2* / NXF5* / Nxf7* / NXF2B* / Q9H1B4* / Q9UBU9* / Q99JX7* / Q9CQE2* / Q9GZY0* / Q9H4D5* / nuclear RNA export factor 2* / nuclear RNA export f...  / complex






 

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