ENSDARG00000061752


Danio rerio

Features
Gene ID: ENSDARG00000061752
  
Biological name :ripor2
  
Synonyms : Q1LU99 / RHO family interacting cell polarization regulator 2 / ripor2
  
Possible biological names infered from orthology : AL512428.1 / Q80U16 / Q9Y4F9
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 31593453
Gene end: 31707892
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000082860
Ensembl peptide - ENSDARP00000122491
NCBI entrez gene - 563800     See in Manteia.
RefSeq - XM_009294297
RefSeq - XM_021468091
RefSeq - NM_001045026
RefSeq - XM_021468090
RefSeq - XM_005159634
RefSeq Peptide - NP_001038491
swissprot - Q1LU99
swissprot - J9JI18
ZFIN ID - ZDB-GENE-060503-342
Ensembl - ENSDARG00000061752
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000041452Gallus gallus
 FAM65BENSGALG00000013624Gallus gallus
 AL512428.1ENSG00000282804Homo sapiens
 Q9Y4F9ENSG00000111913Homo sapiens
 Q80U16ENSMUSG00000036006Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ripor1 / RHO family interacting cell polarization regulator 1 / Q68FE6* / Q6ZS17*ENSDARG0000006217833
ripor3 / RIPOR family member 3 / Q96MK2*ENSDARG0000002097930


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR026136  RIPOR family member 3
 IPR031780  FAM65, N-terminal
 IPR033035  Rho family-interacting cell polarization regulator 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006935 chemotaxis IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007162 negative regulation of cell adhesion ISS
 biological_processGO:0007517 muscle organ development IEA
 biological_processGO:0007605 sensory perception of sound IMP
 biological_processGO:0009968 negative regulation of signal transduction IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0035024 negative regulation of Rho protein signal transduction ISS
 biological_processGO:0045663 positive regulation of myoblast differentiation ISS
 biological_processGO:0048741 skeletal muscle fiber development IEA
 biological_processGO:0051491 positive regulation of filopodium assembly ISS
 biological_processGO:0090023 positive regulation of neutrophil chemotaxis ISS
 biological_processGO:1901741 positive regulation of myoblast fusion ISS
 biological_processGO:1903904 negative regulation of establishment of T cell polarity ISS
 biological_processGO:1905872 negative regulation of protein localization to cell leading edge ISS
 biological_processGO:1990869 cellular response to chemokine ISS
 biological_processGO:2000114 regulation of establishment of cell polarity ISS
 biological_processGO:2000391 positive regulation of neutrophil extravasation ISS
 biological_processGO:2000405 negative regulation of T cell migration ISS
 biological_processGO:2001107 negative regulation of Rho guanyl-nucleotide exchange factor activity ISS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005856 cytoskeleton ISS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 cellular_componentGO:0030175 filopodium ISS
 cellular_componentGO:0032420 stereocilium IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0060171 stereocilium membrane IEA
 molecular_functionGO:0071889 14-3-3 protein binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000243 neuromast neuromast decreased amount , abnormal
Show

 ZFA:0000428 saccule saccule hair cell decreased amount , abnormal
Show

 ZFA:0001089 myoseptum myoseptum U-shaped , abnormal
Show

 ZFA:0001094 whole organism whole organism refractivity , abnormal
whole organism dead , abnormal
Show

 ZFA:0005145 muscle muscle morphology , abnormal
muscle skeletal muscle myofibril disorganized , abnormal
muscle myoseptum disorganized , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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