ENSDARG00000061963


Danio rerio

Features
Gene ID: ENSDARG00000061963
  
Biological name :vrtn
  
Synonyms : vertebrae development associated / vrtn
  
Possible biological names infered from orthology : Q3SYK4 / Q9H8Y1
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 27749133
Gene end: 27755014
  
Corresponding Affymetrix probe sets: Dr.23039.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000083446
swissprot - Z4YHZ3
ZFIN ID - ZDB-GENE-060929-700
Ensembl - ENSDARG00000061963
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VRTNENSGALG00000010232Gallus gallus
 VRTNENSG00000133980Homo sapiens
 VrtnENSMUSG00000071235Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000037 anatomical structure anatomical structure decreased amount , abnormal
anatomical structure increased amount , abnormal
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 ZFA:0000038 margin margin increased amount , abnormal
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 ZFA:0000155 somite somite decreased amount , abnormal
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 ZFA:0000570 optic primordium optic primordium decreased distribution , abnormal
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 ZFA:0001094 whole organism whole organism wholly ventralized , abnormal
whole organism decreased amount , abnormal
whole organism increased amount , abnormal
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 ZFA:0001114 head head decreased size , abnormal
head decreased length , abnormal
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 ZFA:0007018 forebrain neural plate forebrain neural plate decreased distribution , abnormal
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 ZFA:0007034 forebrain neural rod forebrain neural rod decreased distribution , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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