ENSDARG00000062109


Danio rerio

Features
Gene ID: ENSDARG00000062109
  
Biological name :shdb
  
Synonyms : shdb / Src homology 2 domain containing transforming protein D, b
  
Possible biological names infered from orthology : O88834 / Q96IW2 / SH2 domain-containing adapter protein D / SHD / Src homology 2 domain containing transforming protein D
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 21398508
Gene end: 21465808
  
Corresponding Affymetrix probe sets: Dr.4813.1.A1_at (Zebrafish Array)   Dr.4813.2.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000083841
Ensembl peptide - ENSDARP00000153016
NCBI entrez gene - 564537     See in Manteia.
RefSeq - XM_005170476
RefSeq Peptide - NP_001038542
swissprot - Q1LX13
ZFIN ID - ZDB-GENE-030131-6059
Ensembl - ENSDARG00000062109
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SHDENSG00000105251Homo sapiens
 ShdENSMUSG00000039154Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
shda / Src homology 2 domain containing transforming protein D, a / SHD* / Q96IW2* / O88834* / SH2 domain-containing adapter protein D * / Src homology 2 domain containing transforming protein D*ENSDARG0000009424354
she / Src homology 2 domain containing E / Q5VZ18* / Q8BSD5* / SH2 domain-containing adapter protein E *ENSDARG0000008795633
zgc:158464 / si:ch73-116f3.3 / SHF* / Q8CG80* / Q7M4L6* / Src homology 2 domain containing F* / SH2 domain-containing adapter protein F *ENSDARG000001003428


Protein motifs (from Interpro)
Interpro ID Name
 IPR000980  SH2 domain
 IPR035039  SH2 domain-containing adapter protein D


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0009967 positive regulation of signal transduction IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005070 SH3/SH2 adaptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr