ENSDARG00000062612


Danio rerio

Features
Gene ID: ENSDARG00000062612
  
Biological name :dhx37
  
Synonyms : DEAH (Asp-Glu-Ala-His) box polypeptide 37 / dhx37
  
Possible biological names infered from orthology : DEAH-box helicase 37 / Q8IY37
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 4516831
Gene end: 4574328
  
Corresponding Affymetrix probe sets: Dr.2341.1.A1_at (Zebrafish Array)   NM_001083004_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000109335
Ensembl peptide - ENSDARP00000085164
NCBI entrez gene - 100009635     See in Manteia.
RefSeq - NM_001083004
RefSeq - XM_005172444
RefSeq - XM_005172443
RefSeq - XM_021478164
RefSeq - XM_021478163
RefSeq Peptide - NP_001076473
swissprot - F6NQ66
swissprot - B8JLP0
ZFIN ID - ZDB-GENE-030131-4505
Ensembl - ENSDARG00000062612
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DHX37ENSGALG00000002964Gallus gallus
 DHX37ENSG00000150990Homo sapiens
 Dhx37ENSMUSG00000029480Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR002464  DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
 IPR003593  AAA+ ATPase domain
 IPR007502  Helicase-associated domain
 IPR011545  DEAD/DEAH box helicase domain
 IPR011709  Domain of unknown function DUF1605
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048026 positive regulation of mRNA splicing, via spliceosome IPI
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain anterior region decreased size , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0001094 whole organism whole organism anterior-posterior axis decreased length , abnormal
Show

 ZFA:0009052 motor neuron motor neuron synaptic transmission, glycinergic decreased frequency , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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