ENSDARG00000062788


Danio rerio

Features
Gene ID: ENSDARG00000062788
  
Biological name :irg1l
  
Synonyms : immunoresponsive gene 1, like / irg1l
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 11427052
Gene end: 11430610
  
Corresponding Affymetrix probe sets: Dr.10914.1.A1_at (Zebrafish Array)   NM_001077607_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000085591
Ensembl peptide - ENSDARP00000132442
NCBI entrez gene - 562007     See in Manteia.
RefSeq - NM_001077607
RefSeq Peptide - NP_001071075
swissprot - A0JMM8
swissprot - A0A0R4IC07
ZFIN ID - ZDB-GENE-061103-301
Ensembl - ENSDARG00000062788
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000007538Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
acod1 / aconitate decarboxylase 1 / A6NK06*ENSDARG0000006984452


Protein motifs (from Interpro)
Interpro ID Name
 IPR005656  MmgE/PrpD


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009617 response to bacterium IMP
 biological_processGO:0019679 propionate metabolic process, methylcitrate cycle IBA
 biological_processGO:0090594 inflammatory response to wounding IMP
 cellular_componentGO:0005739 mitochondrion IBA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0047547 2-methylcitrate dehydratase activity IBA
 molecular_functionGO:0047613 aconitate decarboxylase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000037 anatomical structure anatomical structure amount , ameliorated
Show

 ZFA:0001058 caudal fin caudal fin epidermal cell amount , ameliorated
caudal fin neutrophil increased amount , ameliorated
Show

 ZFA:0001094 whole organism whole organism decreased life span , abnormal
Show

 ZFA:0001114 head head macrophage increased amount , ameliorated
Show

 ZFA:0009034 epithelial cell epithelial cell position , ameliorated
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr