ENSDARG00000062828


Danio rerio

Features
Gene ID: ENSDARG00000062828
  
Biological name :si:ch73-171o20.1
  
Synonyms : si:ch73-171o20.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 11256617
Gene end: 11264040
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000139527
Ensembl peptide - ENSDARP00000147654
NCBI entrez gene - 563833     See in Manteia.
swissprot - A0A0R4IU24
ZFIN ID - ZDB-GENE-140106-80
Ensembl - ENSDARG00000062828
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
irgf3 / immunity-related GTPase family, f3ENSDARG0000006282076
irgf1 / immunity-related GTPase family, f1ENSDARG0000007077476
irgf2 / immunity-related GTPase family, f2ENSDARG0000009224961
irge4 / immunity-related GTPase family, e4ENSDARG0000007031737
irge1 / immunity-related GTPase family, e1ENSDARG0000001497535
CR391937.1ENSDARG0000010228135
irgq2 / immunity-related GTPase family, q2 / Igtp* / IRGM* / IRGC* / Tgtp2* / Ifi47* / Iigp1* / Irgc1* / Irgm1* / Irgm2* / Tgtp1* / Gm5431* / Q9QZ85* / A1A4Y4* / Gm4841* / Q3T9E4* / Q60766*...ENSDARG0000006865726
irgq1 / immunity-related GTPase family, q1ENSDARG0000008684722
zmp:0000000951ENSDARG0000008911215


Protein motifs (from Interpro)
Interpro ID Name
 IPR007743  Immunity-related GTPases-like
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030385  IRG-type guanine nucleotide-binding (G) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr