ENSDARG00000063310


Danio rerio

Features
Gene ID: ENSDARG00000063310
  
Biological name :oxr1b
  
Synonyms : oxidation resistance 1b / oxr1b
  
Possible biological names infered from orthology : Mus musculus oxidation resistance 1 (Oxr1), transcript variant 8, mRNA. / oxidation resistance 1 / OXR1 / Q4KMM3 / Q8N573
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 7309050
Gene end: 7406933
  
Corresponding Affymetrix probe sets: Dr.2124.1.A1_at (Zebrafish Array)   NM_001045203_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000086807
Ensembl peptide - ENSDARP00000086811
Ensembl peptide - ENSDARP00000125967
NCBI entrez gene - 570476     See in Manteia.
RefSeq - NM_001045203
RefSeq - XM_005159458
RefSeq Peptide - NP_001038668
swissprot - Q1LVA2
swissprot - Q1LVA3
swissprot - F1Q4W8
ZFIN ID - ZDB-GENE-030131-2438
Ensembl - ENSDARG00000063310
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000032504Gallus gallus
 OXR1ENSGALG00000042182Gallus gallus
 OXR1ENSG00000164830Homo sapiens
 Oxr1ENSMUSG00000022307Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-15d5.11 / TLDC2* / A2ACG1* / A0PJX2* / TLD domain-containing protein 2 * / TBC/LysM-associated domain containing 2*ENSDARG0000006351122
LO017815.1 / Danio rerio nuclear receptor coactivator 7-like (LOC792958), mRNA. / NCOA7* / Q8NI08* / nuclear receptor coactivator 7*ENSDARG0000007755913
CABZ01066813.1 / NCOA7* / Q8NI08* / nuclear receptor coactivator 7*ENSDARG0000010111812
tldc1 / Q1LWV7 / TBC/LysM-associated domain containing 1 / Q8K0P3* / Q6P9B6* / TLD domain-containing protein 1 *ENSDARG0000006295110


Protein motifs (from Interpro)
Interpro ID Name
 IPR006571  TLDc domain
 IPR018392  LysM domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr