ENSDARG00000063333


Danio rerio

Features
Gene ID: ENSDARG00000063333
  
Biological name :nup210
  
Synonyms : nucleoporin 210 / nup210
  
Possible biological names infered from orthology : Nuclear pore membrane glycoprotein 210 / Q8TEM1 / Q9QY81
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 4483083
Gene end: 4557964
  
Corresponding Affymetrix probe sets: Dr.18094.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000086821
NCBI entrez gene - 570945     See in Manteia.
RefSeq - XM_002667560
swissprot - F1QC46
ZFIN ID - ZDB-GENE-050208-132
Ensembl - ENSDARG00000063333
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NUP210ENSGALG00000005078Gallus gallus
 NUP210ENSG00000132182Homo sapiens
 Nup210ENSMUSG00000030091Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003343  Bacterial Ig-like, group 2
 IPR008964  Invasin/intimin cell-adhesion fragments


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
Regulation of Glucokinase by Glucokinase Regulatory Protein
snRNP Assembly
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
Transcriptional regulation by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000114 heart heart edematous , abnormal
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 ZFA:0000155 somite somite decreased length , abnormal
somite decreased width , abnormal
somite U-shaped , abnormal
somite U-shaped , exacerbated
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 ZFA:0001056 myotome myotome apoptotic process increased occurrence , abnormal
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 ZFA:0001058 caudal fin caudal fin curved , abnormal
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 ZFA:0001094 whole organism whole organism decreased length , abnormal
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 ZFA:0005145 muscle muscle disorganized , abnormal
muscle disorganized , exacerbated
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 ZFA:0009114 muscle cell muscle cell structure , abnormal
muscle cell skeletal muscle myofibril structure , abnormal
muscle cell undulate , abnormal
muscle cell detached from myoseptum , abnormal
muscle cell structure , exacerbated
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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