ENSDARG00000068262


Danio rerio

Features
Gene ID: ENSDARG00000068262
  
Biological name :vamp5
  
Synonyms : vamp5 / vesicle-associated membrane protein 5
  
Possible biological names infered from orthology : O95183 / Q9Z2P8
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 28297250
Gene end: 28307470
  
Corresponding Affymetrix probe sets: Dr.2788.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000089406
Ensembl peptide - ENSDARP00000122979
NCBI entrez gene - 325484     See in Manteia.
RefSeq - NM_001256606
RefSeq - NM_001256607
RefSeq Peptide - NP_001243535
RefSeq Peptide - NP_001243536
swissprot - A2BG36
swissprot - A2BG37
ZFIN ID - ZDB-GENE-030131-4209
Ensembl - ENSDARG00000068262
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VAMP5ENSG00000168899Homo sapiens
 Vamp5ENSMUSG00000073002Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001388  Synaptobrevin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr