ENSDARG00000068409


Danio rerio

Features
Gene ID: ENSDARG00000068409
  
Biological name :vgll4l
  
Synonyms : vestigial like 4 like / vgll4l
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 31099264
Gene end: 31107537
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000089695
NCBI entrez gene - 562092     See in Manteia.
RefSeq - NM_001079998
RefSeq Peptide - NP_001073467
swissprot - Q1RLU0
ZFIN ID - ZDB-GENE-070112-1682
Ensembl - ENSDARG00000068409
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vgll4a / vestigial-like family member 4a / VGLL4* / Q14135* / Q80V24* / vestigial like family member 4*ENSDARG0000009433224
vgll4b / vestigial-like family member 4b / VGLL4* / Q14135* / Q80V24* / vestigial like family member 4*ENSDARG0000010373021


Protein motifs (from Interpro)
Interpro ID Name
 IPR006627  TDU repeat
 IPR028184  Transcription cofactor vestigial-like protein 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0048701 embryonic cranial skeleton morphogenesis IMP
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001114 head head anterior side collapsed , abnormal
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 ZFA:0001273 ventral mandibular arch ventral mandibular arch open , abnormal
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 ZFA:0001400 ceratohyal cartilage ceratohyal cartilage inverted , abnormal
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 ZFA:0001458 cranial cartilage cranial cartilage hypoplastic , abnormal
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 ZFA:0001461 chondrocranium cartilage chondrocranium cartilage absent , abnormal
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 ZFA:0001516 ceratobranchial cartilage ceratobranchial cartilage absent , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr