ENSDARG00000068515


Danio rerio

Features
Gene ID: ENSDARG00000068515
  
Biological name :chs1
  
Synonyms : chitin synthase 1 / chs1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 285874
Gene end: 303137
  
Corresponding Affymetrix probe sets: Dr.1575.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000112602
Ensembl peptide - ENSDARP00000117793
Ensembl peptide - ENSDARP00000118020
Ensembl peptide - ENSDARP00000121629
Ensembl peptide - ENSDARP00000089905
NCBI entrez gene - 322468     See in Manteia.
RefSeq - NM_001316326
RefSeq - XM_009307025
RefSeq Peptide - NP_001303255
swissprot - F1QC77
swissprot - E7F1A0
swissprot - F1QYS0
swissprot - F1R5W0
swissprot - F1RBW8
ZFIN ID - ZDB-GENE-030131-1188
Ensembl - ENSDARG00000068515
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-264e16.2ENSDARG0000009441537
si:ch211-264e16.1ENSDARG0000006894737
si:ch211-219a15.4ENSDARG0000006895137


Protein motifs (from Interpro)
Interpro ID Name
 IPR004835  Chitin synthase
 IPR020846  Major facilitator superfamily domain
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006031 chitin biosynthetic process IMP
 biological_processGO:0006038 cell wall chitin biosynthetic process IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030428 cell septum IBA
 cellular_componentGO:0071944 cell periphery IBA
 molecular_functionGO:0004100 chitin synthase activity IBA
 molecular_functionGO:0016758 transferase activity, transferring hexosyl groups IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0005807 intestine lumen intestine lumen chitin synthase activity decreased occurrence , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr