ENSDARG00000068596


Danio rerio

Features
Gene ID: ENSDARG00000068596
  
Biological name :cnot11
  
Synonyms : A4QP78 / CCR4-NOT transcription complex, subunit 11 / cnot11
  
Possible biological names infered from orthology : Q9CWN7 / Q9UKZ1
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 56232548
Gene end: 56245149
  
Corresponding Affymetrix probe sets: Dr.6197.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000090050
NCBI entrez gene - 336124     See in Manteia.
RefSeq - NM_001089341
RefSeq Peptide - NP_001082810
swissprot - A4QP78
ZFIN ID - ZDB-GENE-030131-8068
Ensembl - ENSDARG00000068596
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000039563Gallus gallus
 CNOT11ENSG00000158435Homo sapiens
 Cnot11ENSMUSG00000003135Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019312  CCR4-NOT transcription complex subunit 11


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0031047 gene silencing by RNA IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0030014 CCR4-NOT complex IEA


Pathways (from Reactome)
Pathway description
Deadenylation of mRNA
TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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