ENSDARG00000068828


Danio rerio

Features
Gene ID: ENSDARG00000068828
  
Biological name :bloc1s3
  
Synonyms : biogenesis of lysosomal organelles complex-1, subunit 3 / bloc1s3
  
Possible biological names infered from orthology : AC005779.2 / Biosis of lysosome-related organelles complex 1 subunit 3 / Q5U5M8 / Q6QNY0
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 35036368
Gene end: 35101292
  
Corresponding Affymetrix probe sets: Dr.15971.1.S1_at (Zebrafish Array)   NM_001025476_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000090450
Ensembl peptide - ENSDARP00000100799
Ensembl peptide - ENSDARP00000144507
NCBI entrez gene - 553529     See in Manteia.
RefSeq - NM_001025476
RefSeq - XM_005157762
RefSeq Peptide - NP_001020647
swissprot - Q4V924
ZFIN ID - ZDB-GENE-050913-10
Ensembl - ENSDARG00000068828
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AC005779.2ENSG00000267545Homo sapiens
 Q6QNY0ENSG00000189114Homo sapiens
 Q5U5M8ENSMUSG00000057667Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CR387932.1 / Q6QNY0* / Q5U5M8* / BLOC1S3* / AC005779.2* / biogenesis of lysosomal organelles complex 1 subunit 3* / Biosis of lysosome-related organelles complex 1 subunit 3 *ENSDARG00000097344100


Protein motifs (from Interpro)
Interpro ID Name
 IPR017245  BLOC-1 complex, subunit 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016197 endosomal transport IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0031083 BLOC-1 complex IBA


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr