ENSDARG00000069102


Danio rerio

Features
Gene ID: ENSDARG00000069102
  
Biological name :zgc:112962
  
Synonyms : zgc:112962
  
Possible biological names infered from orthology : Q5JTV8 / Q8BYU6 / Q8NFQ8 / Q921T2 / Q9ER81 / Q9H496 / TOR1AIP1 / TOR1AIP2 / torsin 1A interacting protein 1 / torsin 1A interacting protein 2 / torsin A interacting protein 1 / torsin A interacting protein 2
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 21052473
Gene end: 21071754
  
Corresponding Affymetrix probe sets: Dr.25697.1.A1_at (Zebrafish Array)   NM_001017552_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000119210
Ensembl peptide - ENSDARP00000155672
Ensembl peptide - ENSDARP00000151017
Ensembl peptide - ENSDARP00000122472
Ensembl peptide - ENSDARP00000120525
Ensembl peptide - ENSDARP00000091061
Ensembl peptide - ENSDARP00000100558
Ensembl peptide - ENSDARP00000103069
Ensembl peptide - ENSDARP00000111884
Ensembl peptide - ENSDARP00000113074
Ensembl peptide - ENSDARP00000115364
NCBI entrez gene - 548348     See in Manteia.
RefSeq - NM_001105143
RefSeq - XM_005166839
RefSeq - XM_009303893
RefSeq - XM_009303894
RefSeq - XM_009303895
RefSeq - XM_009303896
RefSeq - XM_021478252
RefSeq - NM_001017552
RefSeq Peptide - NP_001017552
RefSeq Peptide - NP_001098613
swissprot - E9QH82
swissprot - E9QGS3
swissprot - E9QFP5
swissprot - A7YYC2
swissprot - F1QFZ5
swissprot - F1QLY6
swissprot - F1RD50
ZFIN ID - ZDB-GENE-050410-15
Ensembl - ENSDARG00000069102
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TOR1AIP1ENSGALG00000029238Gallus gallus
 TOR1AIP2ENSGALG00000004017Gallus gallus
 Q5JTV8ENSG00000143337Homo sapiens
 Q8NFQ8ENSG00000169905Homo sapiens
 Q8BYU6ENSMUSG00000050565Mus musculus
 Q921T2ENSMUSG00000026466Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkeyp-82a1.6 / Q8BYU6* / Q8NFQ8* / Q921T2* / Q9ER81* / Q9H496* / Q5JTV8* / TOR1AIP1* / TOR1AIP2* / torsin A interacting protein 1* / torsin A interacting protein 2* / torsin 1A interacti...ENSDARG0000009433623


Protein motifs (from Interpro)
Interpro ID Name
 IPR008662  Lamina-associated polypeptide 1C


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr