ENSDARG00000069278


Danio rerio

Features
Gene ID: ENSDARG00000069278
  
Biological name :trmt5
  
Synonyms : B8A5G9 / TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) / trmt5
  
Possible biological names infered from orthology : Q32P41 / Q9D0C4 / tRNA (guanine(37)-N1)-methyltransferase / tRNA methyltransferase 5
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 31681988
Gene end: 31687925
  
Corresponding Affymetrix probe sets: Dr.5906.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000080424
NCBI entrez gene - 564078     See in Manteia.
RefSeq - NM_001145583
RefSeq Peptide - NP_001139055
swissprot - B8A5G9
ZFIN ID - ZDB-GENE-030131-5978
Ensembl - ENSDARG00000069278
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRMT5ENSGALG00000011904Gallus gallus
 TRMT5ENSG00000126814Homo sapiens
 Trmt5ENSMUSG00000034442Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR025792  tRNA (guanine(37)-N(1))-methyltransferase, eukaryotic
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase
 IPR030382  SAM-dependent methyltransferase TRM5/TYW2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix ISS
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0009019 tRNA (guanine-N1-)-methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0052906 tRNA (guanine(37)-N(1))-methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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