ENSDARG00000069428


Danio rerio

Features
Gene ID: ENSDARG00000069428
  
Biological name :slbp2
  
Synonyms : slbp2 / stem-loop binding protein 2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 30288570
Gene end: 30293586
  
Corresponding Affymetrix probe sets: Dr.13653.1.A1_at (Zebrafish Array)   NM_001080176_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000091825
NCBI entrez gene - 558918     See in Manteia.
RefSeq - NM_001080176
RefSeq Peptide - NP_001073645
swissprot - A1L2F4
ZFIN ID - ZDB-GENE-070112-1722
Ensembl - ENSDARG00000069428
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slbp / stem-loop binding protein / P97440* / Q14493*ENSDARG0000010055821


Protein motifs (from Interpro)
Interpro ID Name
 IPR026502  Histone RNA stem-loop-binding protein SLBP1/SLBP2
 IPR029344  Histone RNA hairpin-binding protein, RNA-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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